STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc21DnaJ heat shock protein family (Hsp40) member C21. (541 aa)    
Predicted Functional Partners:
nmd3
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
    
 
 0.835
LOC106963880
Peptidase_M24 domain-containing protein.
   
 
 0.771
LOC106955348
Proliferation-associated 2G4, b.
   
 
 0.771
retreg1
Reticulophagy regulator 1.
   
 
 0.766
znf622
Zinc finger protein 622.
   
 
 0.766
retreg3
Reticulophagy regulator family member 3.
   
 
 0.727
retreg2
Reticulophagy regulator family member 2.
   
 
 0.727
LOC106946513
Thioredoxin domain-containing protein.
    
  0.722
prdx6
Peroxiredoxin 6.
    
  0.722
dnajc2
DnaJ (Hsp40) homolog, subfamily C, member 2.
   
 
0.709
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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