Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
pcolce2Procollagen C-endopeptidase enhancer 2b. (390 aa)    
Predicted Functional Partners:
ENSPLAP00000005822
Metalloendopeptidase.
    
 0.799
bmp1
Metalloendopeptidase.
    
 0.799
col22a1
Collagen, type XXII, alpha 1.
    
 0.752
ENSPLAP00000011195
Amnion associated transmembrane protein.
   
 0.715
cthrc1
Collagen triple helix repeat containing 1b.
     
 0.699
LOC106962456
Metalloendopeptidase.
    
 0.697
ENSPLAP00000006971
Alpha-2-HS-glycoprotein 2.
      
 0.545
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.534
LOC106949456
Macrophage stimulating 1 receptor a.
    
  0.534
mst1r
Macrophage stimulating 1 receptor b.
    
  0.534
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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