Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106935373F-box protein 46. (759 aa)    
Predicted Functional Partners:
cul1
Cullin 1b; Belongs to the cullin family.
    
 
 0.936
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.890
LOC106962990
Uncharacterized protein.
      
 0.682
LOC106937213
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 
 0.563
CUL3
Cullin 3; Belongs to the cullin family.
    
 
 0.563
klhl29
Kelch-like family member 29.
      
 0.546
twistnb
Uncharacterized protein.
      
 0.542
thoc7
THO complex 7.
      
 0.541
churc1
Churchill domain containing 1.
      
 0.537
cacul1
CDK2 associated cullin domain 1; Belongs to the cullin family.
    
 
 0.525
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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