STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000005085PHD-type domain-containing protein. (89 aa)    
Predicted Functional Partners:
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.833
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.833
wdr73
WD repeat domain 73.
   
 0.817
LOC106952289
Retinoblastoma binding protein 4.
   
 0.817
ENSPLAP00000014870
CAF1C_H4-bd domain-containing protein.
   
 0.817
rcor2
REST corepressor 2.
    
 0.792
rcor3
REST corepressor 3.
    
 0.792
rcor1
REST corepressor 1.
    
 0.792
ENSPLAP00000022982
Uncharacterized protein.
    
 0.785
mta1
Metastasis associated 1.
   
 0.768
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.