STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bhlhe22Basic helix-loop-helix family, member e22. (272 aa)    
Predicted Functional Partners:
LOC106944780
PR domain containing 8.
   
  
 0.554
barhl2
BarH-like homeobox 2.
   
  
 0.526
nkx2-2
NK2 homeobox 2a.
   
 0.493
nhlh2
Nescient helix loop helix 2.
   
 
 0.454
ptf1a
Pancreas associated transcription factor 1a.
   
 
 0.441
LOC106942582
Homeobox domain-containing protein.
   
 0.438
prdm8
PR domain containing 8b.
   
  
 0.434
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
      
 0.426
INSM1
INSM transcriptional repressor 1.
   
 0.426
INSM2
INSM transcriptional repressor 2.
   
 0.426
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.