STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp13a2Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1167 aa)    
Predicted Functional Partners:
pln
Si:ch211-270g19.5.
    
 0.726
gak
Cyclin G associated kinase.
   
 
 0.711
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 
 0.624
LOC106938697
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.622
LOC106951820
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.622
LOC106964550
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.622
LOC106936796
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.622
atp7a
ATPase copper transporting alpha.
   
0.610
ENSPLAP00000024892
ATPase copper transporting beta.
   
0.610
ENSPLAP00000017986
FXYD domain-containing ion transport regulator; Belongs to the FXYD family.
    
  0.604
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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