STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pard6bPar-6 partitioning defective 6 homolog beta (C. elegans). (405 aa)    
Predicted Functional Partners:
prkcz
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.988
ENSPLAP00000024276
Protein kinase domain-containing protein.
    
 0.984
LOC106952231
Uncharacterized protein.
    
 0.981
CDC42
Cell division cycle 42.
    
 0.977
LOC106964683
Cell division cycle 42.
    
 0.977
MPP5
Membrane palmitoylated protein 5; Belongs to the MAGUK family.
    
0.970
LOC106951125
Uncharacterized protein.
    
 0.957
LOC106951123
Uncharacterized protein.
    
 0.957
mpp5
Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.
    
0.955
LOC106956773
Par-6 family cell polarity regulator gamma b.
  
 
 
0.941
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: medium (44%) [HD]