LOC106947261 protein (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000000341	LOC106947261	ENSPLAP00000000341	ENSPLAP00000005100	ATP-binding cassette, sub-family G (WHITE), member 2d.	Uncharacterized protein.	0.822
ENSPLAP00000000341	LOC106947280	ENSPLAP00000000341	ENSPLAP00000004830	ATP-binding cassette, sub-family G (WHITE), member 2d.	Uncharacterized protein.	0.822
ENSPLAP00000000341	abcg5	ENSPLAP00000000341	ENSPLAP00000002563	ATP-binding cassette, sub-family G (WHITE), member 2d.	ATP-binding cassette, sub-family G (WHITE), member 5.	0.843
ENSPLAP00000017116	LOC106947261	ENSPLAP00000017116	ENSPLAP00000005100	Uncharacterized protein.	Uncharacterized protein.	0.706
ENSPLAP00000017116	LOC106947280	ENSPLAP00000017116	ENSPLAP00000004830	Uncharacterized protein.	Uncharacterized protein.	0.706
LOC106941723	LOC106947261	ENSPLAP00000007215	ENSPLAP00000005100	ATP-binding cassette, sub-family G (WHITE), member 2c.	Uncharacterized protein.	0.822
LOC106941723	LOC106947280	ENSPLAP00000007215	ENSPLAP00000004830	ATP-binding cassette, sub-family G (WHITE), member 2c.	Uncharacterized protein.	0.822
LOC106941723	LOC106962940	ENSPLAP00000007215	ENSPLAP00000023992	ATP-binding cassette, sub-family G (WHITE), member 2c.	ATP-binding cassette, sub-family G (WHITE), member 2a.	0.903
LOC106941723	abcg5	ENSPLAP00000007215	ENSPLAP00000002563	ATP-binding cassette, sub-family G (WHITE), member 2c.	ATP-binding cassette, sub-family G (WHITE), member 5.	0.843
LOC106947261	ENSPLAP00000000341	ENSPLAP00000005100	ENSPLAP00000000341	Uncharacterized protein.	ATP-binding cassette, sub-family G (WHITE), member 2d.	0.822
LOC106947261	ENSPLAP00000017116	ENSPLAP00000005100	ENSPLAP00000017116	Uncharacterized protein.	Uncharacterized protein.	0.706
LOC106947261	LOC106941723	ENSPLAP00000005100	ENSPLAP00000007215	Uncharacterized protein.	ATP-binding cassette, sub-family G (WHITE), member 2c.	0.822
LOC106947261	LOC106947280	ENSPLAP00000005100	ENSPLAP00000004830	Uncharacterized protein.	Uncharacterized protein.	0.901
LOC106947261	LOC106959971	ENSPLAP00000005100	ENSPLAP00000019534	Uncharacterized protein.	PDZ domain containing 1.	0.706
LOC106947261	LOC106962940	ENSPLAP00000005100	ENSPLAP00000023992	Uncharacterized protein.	ATP-binding cassette, sub-family G (WHITE), member 2a.	0.822
LOC106947261	abca12	ENSPLAP00000005100	ENSPLAP00000010287	Uncharacterized protein.	ATP-binding cassette, sub-family A (ABC1), member 12.	0.672
LOC106947261	abcg5	ENSPLAP00000005100	ENSPLAP00000002563	Uncharacterized protein.	ATP-binding cassette, sub-family G (WHITE), member 5.	0.637
LOC106947261	ktn1	ENSPLAP00000005100	ENSPLAP00000003208	Uncharacterized protein.	Kinectin 1.	0.771
LOC106947261	nup210	ENSPLAP00000005100	ENSPLAP00000016091	Uncharacterized protein.	Nucleoporin 210.	0.694
LOC106947280	ENSPLAP00000000341	ENSPLAP00000004830	ENSPLAP00000000341	Uncharacterized protein.	ATP-binding cassette, sub-family G (WHITE), member 2d.	0.822