Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSPLAP00000005116NIDO domain-containing protein. (328 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.580
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.553
ENSPLAP00000006126
Uncharacterized protein.
 
 
  0.544
LOC106965067
Growth arrest-specific 7a.
    
  0.537
gas7
Growth arrest specific 7.
    
  0.537
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.504
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.504
ENSPLAP00000023161
ZP domain-containing protein.
 
  
 0.502
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.477
ranbp2
RAN binding protein 2.
    
 0.457
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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