Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000005145RRM domain-containing protein. (101 aa)    
Predicted Functional Partners:
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.954
LOC106954507
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.944
LOC106953185
RRM domain-containing protein.
   
 0.929
LOC106965063
RRM domain-containing protein.
   
 0.929
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.925
larp7
La ribonucleoprotein domain family, member 7.
   
 0.886
LOC106937209
TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.871
ilf2
Interleukin enhancer binding factor 2.
   
 
 0.870
hnrnph1
Heterogeneous nuclear ribonucleoprotein H1.
   
 0.860
ilf3
Interleukin enhancer binding factor 3b.
   
 
 0.854
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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