Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSPLAP00000005178Transmembrane protein 241. (265 aa)    
Predicted Functional Partners:
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 
 0.735
LOC106955783
Ankyrin repeat domain 29.
      
 0.719
slc35e4
Solute carrier family 35 member E4.
      
 0.719
riok2
RIO kinase 2 (yeast).
      
 0.718
tmem234
Transmembrane protein 234.
      
 0.712
thoc1
THO complex 1.
      
 0.698
mllt11
MLLT11 transcription factor 7 cofactor.
      
 0.684
ENSPLAP00000025826
Mitochondrial ribosomal protein L21.
      
 0.682
cdh22
Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.668
LOC106935671
Cyclin and CBS domain divalent metal cation transport mediator 4a.
   
  
 0.547
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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