LOC106939342 protein (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000013416	ENSPLAP00000015478	ENSPLAP00000013416	ENSPLAP00000015478	Uncharacterized protein.	Spleen tyrosine kinase.	0.953
ENSPLAP00000013416	LOC106939342	ENSPLAP00000013416	ENSPLAP00000005186	Uncharacterized protein.	Tyrosine-protein kinase.	0.757
ENSPLAP00000013416	csk	ENSPLAP00000013416	ENSPLAP00000011313	Uncharacterized protein.	Tyrosine-protein kinase.	0.680
ENSPLAP00000013416	grb2	ENSPLAP00000013416	ENSPLAP00000012052	Uncharacterized protein.	Growth factor receptor-bound protein 2b.	0.613
ENSPLAP00000015049	LOC106939342	ENSPLAP00000015049	ENSPLAP00000005186	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Tyrosine-protein kinase.	0.785
ENSPLAP00000015049	csk	ENSPLAP00000015049	ENSPLAP00000011313	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Tyrosine-protein kinase.	0.558
ENSPLAP00000015478	ENSPLAP00000013416	ENSPLAP00000015478	ENSPLAP00000013416	Spleen tyrosine kinase.	Uncharacterized protein.	0.953
ENSPLAP00000015478	ENSPLAP00000027928	ENSPLAP00000015478	ENSPLAP00000027928	Spleen tyrosine kinase.	Uncharacterized protein.	0.953
ENSPLAP00000015478	LOC106939342	ENSPLAP00000015478	ENSPLAP00000005186	Spleen tyrosine kinase.	Tyrosine-protein kinase.	0.759
ENSPLAP00000015478	csk	ENSPLAP00000015478	ENSPLAP00000011313	Spleen tyrosine kinase.	Tyrosine-protein kinase.	0.587
ENSPLAP00000015478	grb2	ENSPLAP00000015478	ENSPLAP00000012052	Spleen tyrosine kinase.	Growth factor receptor-bound protein 2b.	0.933
ENSPLAP00000027928	ENSPLAP00000015478	ENSPLAP00000027928	ENSPLAP00000015478	Uncharacterized protein.	Spleen tyrosine kinase.	0.953
ENSPLAP00000027928	LOC106939342	ENSPLAP00000027928	ENSPLAP00000005186	Uncharacterized protein.	Tyrosine-protein kinase.	0.757
ENSPLAP00000027928	csk	ENSPLAP00000027928	ENSPLAP00000011313	Uncharacterized protein.	Tyrosine-protein kinase.	0.680
ENSPLAP00000027928	grb2	ENSPLAP00000027928	ENSPLAP00000012052	Uncharacterized protein.	Growth factor receptor-bound protein 2b.	0.613
LOC106939199	LOC106939342	ENSPLAP00000023768	ENSPLAP00000005186	Docking protein 2.	Tyrosine-protein kinase.	0.764
LOC106939199	csk	ENSPLAP00000023768	ENSPLAP00000011313	Docking protein 2.	Tyrosine-protein kinase.	0.652
LOC106939199	grb2	ENSPLAP00000023768	ENSPLAP00000012052	Docking protein 2.	Growth factor receptor-bound protein 2b.	0.586
LOC106939342	ENSPLAP00000013416	ENSPLAP00000005186	ENSPLAP00000013416	Tyrosine-protein kinase.	Uncharacterized protein.	0.757
LOC106939342	ENSPLAP00000015049	ENSPLAP00000005186	ENSPLAP00000015049	Tyrosine-protein kinase.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.785