STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106941815Cyclic nucleotide gated channel beta 3, tandem duplicate 1. (654 aa)    
Predicted Functional Partners:
LOC106949936
Cyclic nucleotide gated channel subunit alpha 1a.
  
0.843
LOC106955174
Cyclic nucleotide gated channel subunit alpha 4.
  
0.840
cnga3
Cyclic nucleotide gated channel subunit alpha 3a.
  
0.839
cnga2
Cyclic nucleotide gated channel alpha 2b.
  
0.838
LOC106935730
Cyclic nucleotide gated channel subunit alpha 1b.
  
0.838
ENSPLAP00000016485
Cyclic nucleotide-binding domain-containing protein.
  
0.837
LOC106939176
Cyclic nucleotide-binding domain-containing protein.
  
0.836
ENSPLAP00000024241
Uncharacterized protein.
   
 0.826
ENSPLAP00000024282
annotation not available
   
 0.826
ENSPLAP00000010842
Calmodulin-like 4a.
   
 0.755
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.