Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
crebzfCREB/ATF bZIP transcription factor. (266 aa)    
Predicted Functional Partners:
ENSPLAP00000027424
WD repeat domain 18.
   
 0.970
tex10
Testis expressed 10.
   
 0.968
LOC106936016
Nucleolar protein 9.
   
 0.967
LOC106936021
Polynucleotide 5'-hydroxyl-kinase NOL9-like.
   
 0.967
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.907
LOC106956110
SUMO specific peptidase 3b.
   
 0.881
senp5
ULP_PROTEASE domain-containing protein.
   
 0.881
LOC106953975
ULP_PROTEASE domain-containing protein.
   
 0.881
xrn2
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
    
 
 0.863
LOC106936789
Activating transcription factor 4a.
    
 
 0.833
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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