STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tent4aTerminal nucleotidyltransferase 4A. (823 aa)    
Predicted Functional Partners:
tent4b
Terminal nucleotidyltransferase 4B.
  
  
 
0.936
TENT4A
Terminal nucleotidyltransferase 4A.
  
  
 
0.935
mtrex
Mtr4 exosome RNA helicase.
   
 
 0.819
zcchc14
Zinc finger, CCHC domain containing 14.
   
 
 0.804
exosc10
Exosome component 10.
   
 
 0.781
cnot9
CCR4-NOT transcription complex subunit 9.
    
   0.775
LOC106947146
Uncharacterized protein.
   
 
 0.771
LOC106947399
Zinc finger, CCHC domain containing 7.
   
 
 0.771
skiv2l
SKI2 homolog, superkiller viralicidic activity 2-like.
   
 
 0.699
znfx1
Zinc finger, NFX1-type containing 1.
    
 
 0.679
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.