Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC106955046ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. (870 aa)    
Predicted Functional Partners:
nphs2
NPHS2 stomatin family member, podocin.
    
 
 0.687
ENSPLAP00000014227
Uncharacterized protein.
    
 0.647
trpc1
Transient receptor potential cation channel, subfamily C, member 1; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.647
trpa1
Transient receptor potential cation channel, subfamily A, member 1b; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.606
LOC106935618
Stromal interaction molecule 1a.
    
 0.554
LOC106964335
Stromal interaction molecule 2b.
    
 0.554
trpm7
Transient receptor potential cation channel, subfamily M, member 7.
    
 0.554
LOC106960418
Stromal interaction molecule 1b.
    
 0.554
LOC106952697
SAM domain-containing protein.
    
 0.554
trpv4
Transient receptor potential cation channel, subfamily V, member 4; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.531
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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