Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC106945781Zinc finger and BTB domain containing 4. (859 aa)    
Predicted Functional Partners:
tmem141
Transmembrane protein 141.
      
 0.721
ap2m1
AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...]
    
  0.719
ENSPLAP00000023084
Uncharacterized protein.
     
 0.710
LOC106953952
Hairy-related 11.
      
 0.684
bend3
Uncharacterized protein.
      
 0.678
ganab
Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.673
stxbp4
Syntaxin binding protein 4.
    
 0.631
ap2s1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
  0.610
pias4
Protein inhibitor of activated STAT, 4a.
   
 0.604
hspa14
Heat shock protein 14; Belongs to the heat shock protein 70 family.
   
 0.576
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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