Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106955720Zgc:101663. (459 aa)    
Predicted Functional Partners:
mgat5b
Uncharacterized protein.
     
 0.938
LOC106952195
Uncharacterized protein.
     
 0.938
LOC106936559
Uncharacterized protein.
     
 0.914
mgat5
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase.
     
 0.914
MGAT4C
MGAT4 family member C.
  
  
 
0.903
mgat4c
Mgat4 family member C.
  
  
 
0.903
LOC106961224
Collagen beta(1-O)galactosyltransferase 2.
      
 0.681
galnt17
Polypeptide N-acetylgalactosaminyltransferase.
    
 
 0.667
npas4
Neuronal PAS domain protein 4a.
   
    0.581
ENSPLAP00000011002
BHLH domain-containing protein.
   
    0.581
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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