Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RSPO3R-spondin 3. (195 aa)    
Predicted Functional Partners:
LOC106945289
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.743
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
   
 0.743
LOC106946991
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.743
LOC106955470
Doublesex and mab-3 related transcription factor 1.
      
 0.644
nog
Noggin; Belongs to the noggin family.
      
 0.643
NOG
Noggin; Belongs to the noggin family.
      
 0.643
egf
Epidermal growth factor.
      
 0.627
rxfp2
Relaxin family peptide receptor 2a.
   
 0.603
LOC106936123
Relaxin family peptide receptor 1.
   
 0.603
znrf3
Zinc and ring finger 3.
    
 0.555
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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