Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000005331Uncharacterized protein. (1023 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.972
LOC106951829
Uncharacterized protein.
    
 0.972
LOC106949934
Regulating synaptic membrane exocytosis 1a.
    
 0.836
LOC106945350
Regulating synaptic membrane exocytosis 3.
    
 0.836
LOC106953575
Translocator protein.
    
 0.703
LOC106953573
Translocator protein.
    
 0.703
LOC106959243
Uncharacterized protein.
   
 0.680
ENSPLAP00000016487
Unc-13 homolog Ba (C. elegans).
   
 0.680
UNC13C
Unc-13 homolog C.
   
 0.680
UNC13B
Unc-13 homolog B.
   
 0.680
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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