Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RAB39BRAB39B, member RAS oncogene family. (213 aa)    
Predicted Functional Partners:
c9orf72
Zgc:100846.
    
 0.993
LOC106948330
UDENN FLCN/SMCR8-type domain-containing protein.
    
 0.963
smcr8
Smith-Magenis syndrome chromosome region, candidate 8a.
    
 0.963
wdr41
WD repeat domain 41.
     
 0.962
ENSPLAP00000000035
Uncharacterized protein.
    
 0.943
faap24
FA core complex associated protein 24.
    
   0.874
rabggta
Rab geranylgeranyltransferase subunit alpha.
    
 0.843
LOC106961785
RUN and FYVE domain containing 1.
    
   0.810
LOC106964665
RAB3A interacting protein (rabin3)-like 1.
    
 0.768
rab3ip
RAB3A interacting protein (rabin3).
    
 0.768
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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