Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc46a2Solute carrier family 46 member 2. (509 aa)    
Predicted Functional Partners:
ENSPLAP00000006307
Sushi domain containing 1.
    
 
 0.727
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.719
elac1
ElaC ribonuclease Z 1.
      
 0.715
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.709
OTOR
Otoraplin.
      
 0.674
slc19a1
Solute carrier family 19 member 1.
      
 0.671
glipr2
GLI pathogenesis-related 2, like; Belongs to the CRISP family.
      
 0.641
LOC106958911
Tudor domain containing 3.
      
 0.596
ENSPLAP00000028697
RMI1_N domain-containing protein.
      
 0.596
psmc5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
    
   0.551
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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