STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc46a2Solute carrier family 46 member 2. (509 aa)    
Predicted Functional Partners:
mfsd10
Major facilitator superfamily domain containing 10.
   
  
 0.571
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.544
ENSPLAP00000006307
Sushi domain containing 1.
      
 0.522
slc29a3
Solute carrier family 29 member 3.
      
 0.483
glipr2
GLI pathogenesis-related 2, like; Belongs to the CRISP family.
      
 0.422
ctsc
Cathepsin C; Belongs to the peptidase C1 family.
      
 0.420
OTOR
Otoraplin.
      
 0.416
LOC106958911
Tudor domain containing 3.
      
 0.408
ENSPLAP00000028697
RMI1_N domain-containing protein.
      
 0.408
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.