STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylt1Xylosyltransferase I. (859 aa)    
Predicted Functional Partners:
b4galt7
Xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I).
     
 0.953
LOC106958720
Xylosyltransferase I.
  
  
 
0.924
xylt2
Xylosyltransferase II.
  
  
 
0.924
LOC106957537
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.636
LOC106961845
Decorin; May affect the rate of fibrils formation.
    
 0.605
b4galt1
DP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, like.
    
 0.571
LOC106959659
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3.
    
 0.571
b4galt4
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4.
    
 0.571
LOC106964729
Si:dkey-199f5.8.
    
 0.571
nelfa
Negative elongation factor complex member A.
    
 0.570
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.