STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmeff2Transmembrane protein with EGF-like and two follistatin-like domains 2a. (354 aa)    
Predicted Functional Partners:
erbb4
Receptor protein-tyrosine kinase.
    
 0.631
mapkap1
MAPK associated protein 1.
      
 0.594
elmo2
Engulfment and cell motility 2.
      
 0.528
LOC106964873
Engulfment and cell motility 1.
      
 0.528
LOC106936686
PH domain-containing protein.
      
 0.528
LOC106960821
Si:dkey-56f14.7.
      
 0.528
gdf3
Growth differentiation factor 3.
    
 0.508
LOC106936058
RNA binding fox-1 homolog 3b.
      
 0.507
sema6d
Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like; Belongs to the semaphorin family.
      
 0.506
ubl7
Ubiquitin-like 7b (bone marrow stromal cell-derived).
      
 0.506
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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