Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106942928Uncharacterized protein. (377 aa)    
Predicted Functional Partners:
itgb3
Integrin beta; Belongs to the integrin beta chain family.
    
  0.578
itgbl1
Integrin, beta-like 1.
    
  0.578
itgb6
Integrin beta; Belongs to the integrin beta chain family.
    
  0.578
itgb5
Integrin beta; Belongs to the integrin beta chain family.
    
  0.578
itgb4
Integrin beta.
    
  0.578
LOC106950752
Integrin beta; Belongs to the integrin beta chain family.
    
  0.578
LOC106964138
Integrin beta; Belongs to the integrin beta chain family.
    
  0.578
itgb1
Integrin beta; Belongs to the integrin beta chain family.
    
  0.578
LOC106949493
Integrin beta.
    
  0.578
apbb1
Amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65).
    
 0.567
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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