STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106935155Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (460 aa)    
Predicted Functional Partners:
ENSPLAP00000009052
ANF_receptor domain-containing protein.
 
  
 0.509
ENSPLAP00000006357
CaM_bdg_C0 domain-containing protein.
    
 0.465
grin1
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
    
0.465
LOC106955388
Ubiquinol-cytochrome c reductase, complex III subunit VII.
     
 0.423
ENSPLAP00000013170
Uncharacterized protein.
   
  0.414
ENSPLAP00000013180
PDZ domain-containing protein.
   
  0.414
ENSPLAP00000013254
SH3 domain-containing protein.
   
  0.414
ENSPLAP00000014622
PDZ domain-containing protein.
   
  0.414
LOC106949527
Discs large MAGUK scaffold protein 5; Belongs to the MAGUK family.
   
  0.414
LOC106952755
Uncharacterized protein; Belongs to the MAGUK family.
   
  0.414
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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