STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106940130Uncharacterized protein. (627 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
   
 0.974
LOC106934486
Receptor protein-tyrosine kinase.
    
 0.854
egfr
Receptor protein-tyrosine kinase.
    
 0.854
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
    
 0.852
LOC106938905
Protein tyrosine phosphatase non-receptor type 11b.
    
 0.852
ptpn11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
 0.852
hras
HRas proto-oncogene, GTPase a.
    
 0.843
LOC106940006
GRB2 related adaptor protein 2a.
   
 0.839
KRAS
KRAS proto-oncogene, GTPase.
    
 0.817
LOC106951627
Zgc:55558.
    
 0.817
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.