STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000005547C2 domain-containing protein. (58 aa)    
Predicted Functional Partners:
LOC106949858
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.535
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.535
LOC106959796
RAB3B, member RAS oncogene family.
   
 
 0.469
LOC106935062
RAB3D, member RAS oncogene family, b.
   
 
 0.469
LOC106961389
Uncharacterized protein.
   
 
 0.469
ENSPLAP00000015416
Uncharacterized protein.
   
 
 0.469
LOC106945488
RAB3C, member RAS oncogene family.
   
 
 0.469
rab3a
RAB3A, member RAS oncogene family, b.
   
 
 0.469
ENSPLAP00000030969
Uncharacterized protein.
   
 
 0.469
RAB27B
RAB27B, member RAS oncogene family.
    
 
 0.457
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.