Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSPLAP00000005583LRRCT domain-containing protein. (357 aa)    
Predicted Functional Partners:
hgfac
HGF activator.
   
 0.738
LOC106957287
SERPIN domain-containing protein; Belongs to the serpin family.
   
 
  0.723
serpinf2
SERPIN domain-containing protein; Belongs to the serpin family.
   
 
  0.723
igfbp5
Insulin-like growth factor binding protein 5a.
    
 0.663
LOC106941271
Uncharacterized protein.
    
 0.663
ENSPLAP00000017399
Purkinje cell protein 4 like 1.
    
 0.602
LOC106957837
Uncharacterized protein.
   
    0.601
habp2
Uncharacterized protein.
   
 0.501
ddx47
DEAD (Asp-Glu-Ala-Asp) box polypeptide 47; Belongs to the DEAD box helicase family.
    
 0.500
wdr90
WD repeat domain 90.
    
   0.481
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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