Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000005658Uncharacterized protein. (466 aa)    
Predicted Functional Partners:
nphp4
Uncharacterized protein.
    
 0.761
ENSPLAP00000030428
Nephronophthisis 4.
    
 0.761
CDC42
Cell division cycle 42.
    
 0.670
LOC106964683
Cell division cycle 42.
    
 0.670
flcn
Folliculin.
    
 
 0.626
sntb2
Syntrophin, beta 2.
      
 0.623
LOC106958338
Profilin; Belongs to the profilin family.
    
 0.592
LOC106946385
Profilin; Belongs to the profilin family.
    
 0.592
LOC106953049
Profilin; Belongs to the profilin family.
    
 0.592
LOC106949068
Dishevelled associated activator of morphogenesis 1b.
    
 0.576
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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