tapt1 protein (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106946517	tapt1	ENSPLAP00000002574	ENSPLAP00000005679	SUN domain-containing protein.	Transmembrane anterior posterior transformation 1b.	0.778
LOC106950941	tapt1	ENSPLAP00000011562	ENSPLAP00000005679	RIC3 domain-containing protein.	Transmembrane anterior posterior transformation 1b.	0.518
haus3	lap3	ENSPLAP00000017381	ENSPLAP00000022808	HAUS augmin-like complex, subunit 3.	Leucine aminopeptidase 3.	0.415
haus3	tapt1	ENSPLAP00000017381	ENSPLAP00000005679	HAUS augmin-like complex, subunit 3.	Transmembrane anterior posterior transformation 1b.	0.533
lap3	haus3	ENSPLAP00000022808	ENSPLAP00000017381	Leucine aminopeptidase 3.	HAUS augmin-like complex, subunit 3.	0.415
lap3	tapt1	ENSPLAP00000022808	ENSPLAP00000005679	Leucine aminopeptidase 3.	Transmembrane anterior posterior transformation 1b.	0.519
mfsd6l	tapt1	ENSPLAP00000004260	ENSPLAP00000005679	Major facilitator superfamily domain containing 6-like.	Transmembrane anterior posterior transformation 1b.	0.519
rps16	tapt1	ENSPLAP00000024868	ENSPLAP00000005679	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	Transmembrane anterior posterior transformation 1b.	0.533
suco	tapt1	ENSPLAP00000012752	ENSPLAP00000005679	SUN domain containing ossification factor.	Transmembrane anterior posterior transformation 1b.	0.778
tapt1	LOC106946517	ENSPLAP00000005679	ENSPLAP00000002574	Transmembrane anterior posterior transformation 1b.	SUN domain-containing protein.	0.778
tapt1	LOC106950941	ENSPLAP00000005679	ENSPLAP00000011562	Transmembrane anterior posterior transformation 1b.	RIC3 domain-containing protein.	0.518
tapt1	haus3	ENSPLAP00000005679	ENSPLAP00000017381	Transmembrane anterior posterior transformation 1b.	HAUS augmin-like complex, subunit 3.	0.533
tapt1	lap3	ENSPLAP00000005679	ENSPLAP00000022808	Transmembrane anterior posterior transformation 1b.	Leucine aminopeptidase 3.	0.519
tapt1	mfsd6l	ENSPLAP00000005679	ENSPLAP00000004260	Transmembrane anterior posterior transformation 1b.	Major facilitator superfamily domain containing 6-like.	0.519
tapt1	rps16	ENSPLAP00000005679	ENSPLAP00000024868	Transmembrane anterior posterior transformation 1b.	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.533
tapt1	suco	ENSPLAP00000005679	ENSPLAP00000012752	Transmembrane anterior posterior transformation 1b.	SUN domain containing ossification factor.	0.778
tapt1	tbccd1	ENSPLAP00000005679	ENSPLAP00000001029	Transmembrane anterior posterior transformation 1b.	TBCC domain containing 1.	0.521
tapt1	top3b	ENSPLAP00000005679	ENSPLAP00000008547	Transmembrane anterior posterior transformation 1b.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.553
tapt1	zcrb1	ENSPLAP00000005679	ENSPLAP00000021159	Transmembrane anterior posterior transformation 1b.	Zinc finger CCHC-type and RNA binding motif 1.	0.534
tbccd1	tapt1	ENSPLAP00000001029	ENSPLAP00000005679	TBCC domain containing 1.	Transmembrane anterior posterior transformation 1b.	0.521