ENSPLAP00000005690 protein (Poecilia latipinna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000000971	ENSPLAP00000005690	ENSPLAP00000000971	ENSPLAP00000005690	Protein kinase domain-containing protein.	Ig-like domain-containing protein.	0.424
ENSPLAP00000000971	ENSPLAP00000019621	ENSPLAP00000000971	ENSPLAP00000019621	Protein kinase domain-containing protein.	Ig-like domain-containing protein.	0.810
ENSPLAP00000000971	LOC106948690	ENSPLAP00000000971	ENSPLAP00000018640	Protein kinase domain-containing protein.	Vav 3 guanine nucleotide exchange factor b.	0.421
ENSPLAP00000000971	LOC106959947	ENSPLAP00000000971	ENSPLAP00000001199	Protein kinase domain-containing protein.	Netrin g1a.	0.421
ENSPLAP00000000971	pidd1	ENSPLAP00000000971	ENSPLAP00000001818	Protein kinase domain-containing protein.	P53-induced death domain protein 1.	0.498
ENSPLAP00000005690	ENSPLAP00000000971	ENSPLAP00000005690	ENSPLAP00000000971	Ig-like domain-containing protein.	Protein kinase domain-containing protein.	0.424
ENSPLAP00000005690	ENSPLAP00000019621	ENSPLAP00000005690	ENSPLAP00000019621	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.424
ENSPLAP00000005690	LOC106948690	ENSPLAP00000005690	ENSPLAP00000018640	Ig-like domain-containing protein.	Vav 3 guanine nucleotide exchange factor b.	0.468
ENSPLAP00000005690	LOC106959947	ENSPLAP00000005690	ENSPLAP00000001199	Ig-like domain-containing protein.	Netrin g1a.	0.468
ENSPLAP00000005690	PTK7	ENSPLAP00000005690	ENSPLAP00000029954	Ig-like domain-containing protein.	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.419
ENSPLAP00000005690	mre11	ENSPLAP00000005690	ENSPLAP00000006503	Ig-like domain-containing protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.409
ENSPLAP00000005690	pidd1	ENSPLAP00000005690	ENSPLAP00000001818	Ig-like domain-containing protein.	P53-induced death domain protein 1.	0.434
ENSPLAP00000005690	rad50	ENSPLAP00000005690	ENSPLAP00000027617	Ig-like domain-containing protein.	RAD50 homolog, double strand break repair protein.	0.422
ENSPLAP00000005690	wdr90	ENSPLAP00000005690	ENSPLAP00000015048	Ig-like domain-containing protein.	WD repeat domain 90.	0.465
ENSPLAP00000019621	ENSPLAP00000000971	ENSPLAP00000019621	ENSPLAP00000000971	Ig-like domain-containing protein.	Protein kinase domain-containing protein.	0.810
ENSPLAP00000019621	ENSPLAP00000005690	ENSPLAP00000019621	ENSPLAP00000005690	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.424
ENSPLAP00000019621	LOC106948690	ENSPLAP00000019621	ENSPLAP00000018640	Ig-like domain-containing protein.	Vav 3 guanine nucleotide exchange factor b.	0.421
ENSPLAP00000019621	LOC106959947	ENSPLAP00000019621	ENSPLAP00000001199	Ig-like domain-containing protein.	Netrin g1a.	0.421
ENSPLAP00000019621	pidd1	ENSPLAP00000019621	ENSPLAP00000001818	Ig-like domain-containing protein.	P53-induced death domain protein 1.	0.498
LOC106948690	ENSPLAP00000000971	ENSPLAP00000018640	ENSPLAP00000000971	Vav 3 guanine nucleotide exchange factor b.	Protein kinase domain-containing protein.	0.421