Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSPLAP00000005709UFM1-specific peptidase 1 (non-functional). (233 aa)    
Predicted Functional Partners:
ufm1
Ubiquitin-fold modifier 1.
  
 
 
 0.952
odr4
Odr-4 GPCR localization factor homolog.
   
 
 0.862
uba5
Ubiquitin-like modifier activating enzyme 5.
  
  
 0.767
UFC1
Ubiquitin-fold modifier conjugating enzyme 1.
  
  
 0.758
cdk5rap3
CDK5 regulatory subunit associated protein 3.
   
  
 0.656
ufl1
UFM1-specific ligase 1.
   
  
 0.650
DDRGK1
DDRGK domain containing 1.
    
 
 0.613
klhl42
Kelch-like family, member 42.
      
 0.428
ENSPLAP00000016184
Uncharacterized protein.
      
 0.412
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
      
 0.412
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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