STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kpna1Importin subunit alpha; Belongs to the importin alpha family. (538 aa)    
Predicted Functional Partners:
cse1l
CSE1 chromosome segregation 1-like (yeast).
   
 0.985
LOC106938010
V-rel avian reticuloendotheliosis viral oncogene homolog A.
    
 0.974
nfkb1
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
    
  0.966
kpnb1
Karyopherin (importin) beta 1.
   
 0.951
kpna3
Importin subunit alpha; Belongs to the importin alpha family.
  
0.948
kpna4
Importin subunit alpha; Belongs to the importin alpha family.
  
0.948
ranbp2
RAN binding protein 2.
   
 
 0.826
REL
REL proto-oncogene, NF-kB subunit.
    
 0.820
nup50
Nucleoporin 50.
   
 
 0.789
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.785
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.