STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdcd10Programmed cell death 10b. (210 aa)    
Predicted Functional Partners:
LOC106950570
MOB family member 4, phocein.
   
 
 0.974
slmap
Sarcolemma associated protein a.
    
 
 0.969
ENSPLAP00000001901
Uncharacterized protein.
    
 
 0.958
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.958
LOC106960967
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.951
cttnbp2nl
CTTNBP2 N-terminal like a.
    
 
 0.943
LOC106959475
CTTNBP2 N-terminal like b.
    
 
 0.943
ENSPLAP00000013174
CCM2 scaffold protein.
    
 
 0.940
ENSPLAP00000026416
Uncharacterized protein.
    
 
 0.940
LOC106948003
Sarcolemma associated protein b.
    
 
 0.937
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.