Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mnx1Motor neuron and pancreas homeobox 1. (320 aa)    
Predicted Functional Partners:
tbx20
T-box transcription factor 20.
    
 
 0.745
ptf1a
Pancreas associated transcription factor 1a.
    
 
 0.736
rfx4
Regulatory factor X, 4.
      
 0.694
LOC106937625
TGF_BETA_2 domain-containing protein.
      
 0.675
LOC106935364
Regulatory factor X, 6.
      
 0.639
neurod1
Neurogenic differentiation factor.
    
 
 0.624
ENSPLAP00000027112
Neurogenin 3.
    
 
 0.621
LOC106940857
ISL LIM homeobox 1.
    
 0.580
isl2
ISL LIM homeobox 2a.
    
 0.580
ISL2
ISL LIM homeobox 2b.
    
 0.580
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.