Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
prkar1bProtein kinase, cAMP-dependent, regulatory, type I, beta. (380 aa)    
Predicted Functional Partners:
LOC106946593
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
 
 
 0.993
prkacb
Uncharacterized protein.
 
 
 0.992
LOC106941471
Uncharacterized protein; Belongs to the protein kinase superfamily.
 
 
 0.992
LOC106955448
Protein kinase, cAMP-dependent, catalytic, beta b; Belongs to the protein kinase superfamily.
 
 
 0.992
prkaca
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.
 
 
 0.970
LOC106947408
Protein kinase, cAMP-dependent, regulatory, type II, alpha A.
  
  
 
0.921
LOC106960336
Protein kinase, cAMP-dependent, regulatory, type II, alpha, B.
  
  
0.904
lipe
Lipase, hormone-sensitive b.
    
 0.903
LOC106946893
Lipase, hormone-sensitive a.
    
 0.903
prkar2b
Protein kinase cAMP-dependent type II regulatory subunit beta.
     
 
0.900
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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