Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
LOC106951028TRAF2 and NCK interacting kinase a. (1282 aa)    
Predicted Functional Partners:
nck1
Cytoplasmic protein.
    
 
 0.570
nck2
Cytoplasmic protein.
    
 
 0.570
lats2
Large tumor suppressor kinase 2.
    
 
 0.554
lats1
Large tumor suppressor kinase 1.
    
 
 0.554
disc1
DISC1 scaffold protein.
    
 
 0.529
traf4
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.521
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.516
LOC106950570
MOB family member 4, phocein.
    
 
 0.504
NANOS2
Nanos C2HC-type zinc finger 2; Belongs to the nanos family.
    
   0.476
LOC106944734
Thioredoxin; Belongs to the thioredoxin family.
     
  0.469
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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