Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ncf2Neutrophil cytosolic factor 2. (486 aa)    
Predicted Functional Partners:
ncf1
Neutrophil cytosolic factor 1.
   
 0.997
ncf4
Neutrophil cytosolic factor 4.
   
 0.989
LOC106951250
Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.
   
 0.982
LOC106949507
Cytochrome b-245, beta polypeptide (chronic granulomatous disease).
   
 0.949
nox1
NADPH oxidase 1.
   
 0.915
nox4
FAD-binding FR-type domain-containing protein.
   
 0.887
nox5
NADPH oxidase, EF-hand calcium binding domain 5.
   
 0.887
LOC106963758
NADPH oxidase organizer 1b.
   
 0.875
noxo1
NADPH oxidase organizer 1a.
   
 0.875
LOC106958144
Dual oxidase.
   
 0.872
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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