STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ripk2Receptor-interacting serine-threonine kinase 2. (581 aa)    
Predicted Functional Partners:
LOC106964079
X-linked inhibitor of apoptosis.
   
 0.996
nod1
Nucleotide-binding oligomerization domain containing 1.
   
 0.984
ENSPLAP00000016759
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
  0.982
nod2
Nucleotide-binding oligomerization domain containing 2.
   
 0.977
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.976
birc2
Baculoviral IAP repeat containing 2.
   
 0.970
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.970
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.965
tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1.
   
 0.963
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.955
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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