STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trim59Tripartite motif containing 59. (433 aa)    
Predicted Functional Partners:
ecsit
ECSIT signalling integrator.
    
 
 0.632
sting1
Transmembrane protein 173.
    
  0.605
rps27a
Ribosomal protein S27a.
    
  0.556
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.555
ENSPLAP00000021250
ANK_REP_REGION domain-containing protein.
    
 0.549
ENSPLAP00000027457
Tripartite motif containing 32.
    
0.531
fbxl5
F-box and leucine-rich repeat protein 5.
      
 0.513
TMEM43
Uncharacterized protein.
      
 0.513
themis2
Thymocyte selection associated family member 2.
      
 0.513
bahd1
Bromo adjacent homology domain containing 1.
      
 0.510
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.