STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106960655Pep_M12B_propep domain-containing protein. (129 aa)    
Predicted Functional Partners:
LOC106958916
Tetraspanin.
    
 0.758
ENSPLAP00000021951
Ephrin-A2a; Belongs to the ephrin family.
    
 0.695
efna2
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
    
 0.695
tspan14
Tetraspanin.
   
 0.648
adam17
ADAM metallopeptidase domain 17b.
     
 0.646
LOC106954181
ADAM metallopeptidase domain 17a.
     
 0.646
LOC106961789
Heparin-binding EGF-like growth factor a.
     
 0.608
ENSPLAP00000016759
Nerve growth factor receptor a (TNFR superfamily, member 16).
     
 0.596
LOC106955286
Si:ch1073-396h14.1.
     
0.585
LOC106941825
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
     
 0.574
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.