LOC106951783 protein (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000010703	LOC106951783	ENSPLAP00000010703	ENSPLAP00000005944	RAB11 family interacting protein 1 (class I) b.	RAB11a, member RAS oncogene family, like.	0.934
ENSPLAP00000010703	rab11fip4	ENSPLAP00000010703	ENSPLAP00000014222	RAB11 family interacting protein 1 (class I) b.	RAB11 family interacting protein 4 (class II) b.	0.544
ENSPLAP00000026141	LOC106951783	ENSPLAP00000026141	ENSPLAP00000005944	FIP-RBD domain-containing protein.	RAB11a, member RAS oncogene family, like.	0.821
LOC106950388	LOC106951783	ENSPLAP00000006420	ENSPLAP00000005944	Uncharacterized protein.	RAB11a, member RAS oncogene family, like.	0.964
LOC106950388	LOC106960428	ENSPLAP00000006420	ENSPLAP00000027003	Uncharacterized protein.	RAB11 family interacting protein 4 (class II) a.	0.577
LOC106950388	rab11fip4	ENSPLAP00000006420	ENSPLAP00000014222	Uncharacterized protein.	RAB11 family interacting protein 4 (class II) b.	0.577
LOC106951783	ENSPLAP00000010703	ENSPLAP00000005944	ENSPLAP00000010703	RAB11a, member RAS oncogene family, like.	RAB11 family interacting protein 1 (class I) b.	0.934
LOC106951783	ENSPLAP00000026141	ENSPLAP00000005944	ENSPLAP00000026141	RAB11a, member RAS oncogene family, like.	FIP-RBD domain-containing protein.	0.821
LOC106951783	LOC106950388	ENSPLAP00000005944	ENSPLAP00000006420	RAB11a, member RAS oncogene family, like.	Uncharacterized protein.	0.964
LOC106951783	LOC106956677	ENSPLAP00000005944	ENSPLAP00000030907	RAB11a, member RAS oncogene family, like.	RAB11 family interacting protein 5a (class I).	0.906
LOC106951783	LOC106960428	ENSPLAP00000005944	ENSPLAP00000027003	RAB11a, member RAS oncogene family, like.	RAB11 family interacting protein 4 (class II) a.	0.842
LOC106951783	LOC106964665	ENSPLAP00000005944	ENSPLAP00000003979	RAB11a, member RAS oncogene family, like.	RAB3A interacting protein (rabin3)-like 1.	0.808
LOC106951783	exoc2	ENSPLAP00000005944	ENSPLAP00000003497	RAB11a, member RAS oncogene family, like.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.892
LOC106951783	rab11fip2	ENSPLAP00000005944	ENSPLAP00000000512	RAB11a, member RAS oncogene family, like.	RAB11 family interacting protein 2 (class I).	0.908
LOC106951783	rab11fip4	ENSPLAP00000005944	ENSPLAP00000014222	RAB11a, member RAS oncogene family, like.	RAB11 family interacting protein 4 (class II) b.	0.842
LOC106951783	rab11fip5	ENSPLAP00000005944	ENSPLAP00000010406	RAB11a, member RAS oncogene family, like.	Uncharacterized protein.	0.906
LOC106956677	LOC106951783	ENSPLAP00000030907	ENSPLAP00000005944	RAB11 family interacting protein 5a (class I).	RAB11a, member RAS oncogene family, like.	0.906
LOC106960428	LOC106950388	ENSPLAP00000027003	ENSPLAP00000006420	RAB11 family interacting protein 4 (class II) a.	Uncharacterized protein.	0.577
LOC106960428	LOC106951783	ENSPLAP00000027003	ENSPLAP00000005944	RAB11 family interacting protein 4 (class II) a.	RAB11a, member RAS oncogene family, like.	0.842
LOC106960428	LOC106964665	ENSPLAP00000027003	ENSPLAP00000003979	RAB11 family interacting protein 4 (class II) a.	RAB3A interacting protein (rabin3)-like 1.	0.748