Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
puraPurine-rich element binding protein Ab. (281 aa)    
Predicted Functional Partners:
LOC106956221
RNA binding motif protein 4.1.
    
 
 0.664
LOC106956330
Uncharacterized protein.
   
   0.643
PURB
Purine rich element binding protein B.
   
   0.643
adarb2
Adenosine deaminase RNA specific B2 (inactive).
      
 0.636
zcrb1
Zinc finger CCHC-type and RNA binding motif 1.
    
   0.612
HNRNPA3
Heterogeneous nuclear ribonucleoprotein A3.
    
 
 0.593
rfc3
Replication factor C (activator 1) 3.
    
   0.588
e2f1
E2F transcription factor 1.
    
 
 0.576
LOC106949442
Chemokine (C-C motif) receptor 8.1; Belongs to the G-protein coupled receptor 1 family.
      
 0.566
fmr1
Fragile X mental retardation 1.
    
 
 0.542
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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