pllp protein (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

pllp

Plasmolipin. (161 aa)

Predicted Functional Partners:

LOC106965171

0.567

tpd52

0.533

LOC106954197

0.531

LOC106949598

0.507

LOC106946608

0.506

SEPTIN7

0.505

CKLF

0.504

ENSPLAP00000029654

0.504

LOC106961033

0.461

LOC106936540

0.443

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CKLF	pllp	ENSPLAP00000023389	ENSPLAP00000006004	Chemokine like factor.	Plasmolipin.	0.504
ENSPLAP00000029654	LOC106946608	ENSPLAP00000029654	ENSPLAP00000001518	Myelin protein zero.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.506
ENSPLAP00000029654	LOC106954197	ENSPLAP00000029654	ENSPLAP00000026917	Myelin protein zero.	Tetraspanin.	0.506
ENSPLAP00000029654	LOC106965171	ENSPLAP00000029654	ENSPLAP00000025108	Myelin protein zero.	Proteolipid protein 1a.	0.514
ENSPLAP00000029654	SEPTIN7	ENSPLAP00000029654	ENSPLAP00000025917	Myelin protein zero.	Septin 7; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.506
ENSPLAP00000029654	pllp	ENSPLAP00000029654	ENSPLAP00000006004	Myelin protein zero.	Plasmolipin.	0.504
LOC106936540	SEPTIN7	ENSPLAP00000007740	ENSPLAP00000025917	PH domain-containing protein.	Septin 7; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.538
LOC106936540	pllp	ENSPLAP00000007740	ENSPLAP00000006004	PH domain-containing protein.	Plasmolipin.	0.443
LOC106946608	ENSPLAP00000029654	ENSPLAP00000001518	ENSPLAP00000029654	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Myelin protein zero.	0.506
LOC106946608	LOC106954197	ENSPLAP00000001518	ENSPLAP00000026917	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Tetraspanin.	0.513
LOC106946608	LOC106961033	ENSPLAP00000001518	ENSPLAP00000008154	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.933
LOC106946608	LOC106965171	ENSPLAP00000001518	ENSPLAP00000025108	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Proteolipid protein 1a.	0.569
LOC106946608	SEPTIN7	ENSPLAP00000001518	ENSPLAP00000025917	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Septin 7; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.508
LOC106946608	pllp	ENSPLAP00000001518	ENSPLAP00000006004	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Plasmolipin.	0.506
LOC106949598	pllp	ENSPLAP00000013489	ENSPLAP00000006004	Angiomotin like 2a.	Plasmolipin.	0.507
LOC106954197	ENSPLAP00000029654	ENSPLAP00000026917	ENSPLAP00000029654	Tetraspanin.	Myelin protein zero.	0.506
LOC106954197	LOC106946608	ENSPLAP00000026917	ENSPLAP00000001518	Tetraspanin.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.513
LOC106954197	LOC106965171	ENSPLAP00000026917	ENSPLAP00000025108	Tetraspanin.	Proteolipid protein 1a.	0.565
LOC106954197	SEPTIN7	ENSPLAP00000026917	ENSPLAP00000025917	Tetraspanin.	Septin 7; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.511
LOC106954197	pllp	ENSPLAP00000026917	ENSPLAP00000006004	Tetraspanin.	Plasmolipin.	0.531