STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000006016Pleckstrin and Sec7 domain containing 2. (332 aa)    
Predicted Functional Partners:
ENSPLAP00000006176
SEC7 domain-containing protein.
 
      0.891
ENSPLAP00000013365
SEC7 domain-containing protein.
 
      0.655
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
     
 0.590
fbxo8
F-box protein 8.
     
 0.476
ENSPLAP00000018170
Uncharacterized protein.
     
 0.476
LOC106949113
Cytohesin 1a.
     
 0.467
CYTH3
Cytohesin 3.
     
 0.467
LOC106961777
Uncharacterized protein.
     
 0.467
ENSPLAP00000019674
Cytohesin 1b.
     
 0.467
LOC106953512
Cytohesin 2.
     
 0.467
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.