STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
elavl4ELAV-like protein; Belongs to the RRM elav family. (369 aa)    
Predicted Functional Partners:
TRA2B
Transformer 2 beta homolog.
  
 0.640
tra2b
Transformer 2 beta homolog.
  
 0.634
LOC106935437
Uncharacterized protein.
  
 
0.613
pabpc4
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
  
 
0.612
pabpc1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
  
 
0.611
LOC106961328
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
  
 
0.609
LOC106936058
RNA binding fox-1 homolog 3b.
  
 0.596
ncl
Nucleolin.
  
0.595
LOC106953519
RNA binding fox-1 homolog 1, like.
  
 0.591
LOC106962366
Exportin 1 (CRM1 homolog, yeast) a.
   
 
 0.587
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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