STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sptssbSerine palmitoyltransferase, small subunit B. (80 aa)    
Predicted Functional Partners:
LOC106943916
Serine palmitoyltransferase, long chain base subunit 1.
    
 0.798
LOC106943913
Serine palmitoyltransferase 1-like.
    
 0.798
ENSPLAP00000027217
Uncharacterized protein.
    
 0.798
sptssa
Serine palmitoyltransferase, small subunit A.
  
  
0.774
LOC106943727
Uncharacterized protein.
    
 0.681
LOC106943726
Serine palmitoyltransferase 3-like.
    
 0.681
ENSPLAP00000008282
Aminotran_1_2 domain-containing protein.
    
 0.681
sptlc2
Serine palmitoyltransferase, long chain base subunit 2b.
    
 0.681
LOC106936189
Isthmin 1.
    
 0.681
LOC106937586
Serine palmitoyltransferase, long chain base subunit 2a.
    
 0.681
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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