Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC106936335 | LOC106952296 | ENSPLAP00000027048 | ENSPLAP00000008558 | SHMT domain-containing protein. | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | 0.969 |
LOC106936335 | SHMT2 | ENSPLAP00000027048 | ENSPLAP00000012948 | SHMT domain-containing protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.954 |
LOC106936335 | amt | ENSPLAP00000027048 | ENSPLAP00000026522 | SHMT domain-containing protein. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | 0.980 |
LOC106936335 | atic | ENSPLAP00000027048 | ENSPLAP00000003976 | SHMT domain-containing protein. | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | 0.996 |
LOC106936335 | gart | ENSPLAP00000027048 | ENSPLAP00000001708 | SHMT domain-containing protein. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.999 |
LOC106936335 | mtfmt | ENSPLAP00000027048 | ENSPLAP00000020440 | SHMT domain-containing protein. | Mitochondrial methionyl-tRNA formyltransferase. | 0.952 |
LOC106936335 | mthfd1l | ENSPLAP00000027048 | ENSPLAP00000030770 | SHMT domain-containing protein. | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like. | 0.969 |
LOC106936335 | mthfd2 | ENSPLAP00000027048 | ENSPLAP00000006104 | SHMT domain-containing protein. | Uncharacterized protein. | 0.981 |
LOC106936335 | mthfr | ENSPLAP00000027048 | ENSPLAP00000004716 | SHMT domain-containing protein. | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.968 |
LOC106936335 | mthfs | ENSPLAP00000027048 | ENSPLAP00000024327 | SHMT domain-containing protein. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.815 |
LOC106952296 | LOC106936335 | ENSPLAP00000008558 | ENSPLAP00000027048 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | SHMT domain-containing protein. | 0.969 |
LOC106952296 | SHMT2 | ENSPLAP00000008558 | ENSPLAP00000012948 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.982 |
LOC106952296 | amt | ENSPLAP00000008558 | ENSPLAP00000026522 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | 0.966 |
LOC106952296 | atic | ENSPLAP00000008558 | ENSPLAP00000003976 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | 0.996 |
LOC106952296 | gart | ENSPLAP00000008558 | ENSPLAP00000001708 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.998 |
LOC106952296 | mtfmt | ENSPLAP00000008558 | ENSPLAP00000020440 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | Mitochondrial methionyl-tRNA formyltransferase. | 0.977 |
LOC106952296 | mthfd1l | ENSPLAP00000008558 | ENSPLAP00000030770 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like. | 0.955 |
LOC106952296 | mthfd2 | ENSPLAP00000008558 | ENSPLAP00000006104 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | Uncharacterized protein. | 0.978 |
LOC106952296 | mthfr | ENSPLAP00000008558 | ENSPLAP00000004716 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.978 |
LOC106952296 | mthfs | ENSPLAP00000008558 | ENSPLAP00000024327 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.980 |
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