STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phf12PHD finger protein 12b. (909 aa)    
Predicted Functional Partners:
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 
 0.964
arid4b
Translocase of outer mitochondrial membrane 20.
    
 
 0.964
LOC106962643
Mortality factor 4 like 1.
    
 
 0.961
LOC106959377
MRG domain-containing protein.
    
 
 0.961
gatad1
GATA zinc finger domain containing 1.
    
 
 0.943
LOC106952289
Retinoblastoma binding protein 4.
    
 
 0.932
ENSPLAP00000014870
CAF1C_H4-bd domain-containing protein.
    
 
 0.932
sin3a
SIN3 transcription regulator family member Aa.
   
 
 0.928
LOC106952614
SIN3 transcription regulator family member Ab.
   
 
 0.928
sin3b
SIN3 transcription regulator family member B.
   
 
 0.928
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.